Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
| 1OFQ Chain:A ((213-332)) | --------------------------------------------------------------------------------------DACQAAAHSHHFMGVT-HGVAAITTTKG-NEHCFVILRGGK-KGTNYDAKSVAEAKAQLPAGSNGLMIDYSHGNSNKDFRNQPKVNDVVCEQIANGENAITGVMIESN--INEGNQGI-PAEGKA------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OFQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 37203 for 679 contacts (54.8/contact) +
2D Compatibility (PS) -12233 + (NN) 2411 + (LL) 8528
1D Compatibility (HY) -1600 + (ID) 1500
Total energy: 32809.0 ( 48.32 by residue)
QMean score : 0.056
|
|
|