Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
3R12 Chain:A ((47-255))
------IEHTNLKPFATPDDIKKLCLEARENRFHGVCVNPCYVKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSSGVKIVQGGE-----
General information:
TITO was launched using:
RESULT:
Template:
3R12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101458 for 1888 contacts (-53.7/contact) +
2D Compatibility (PS) -23681 + (NN) -10589 + (LL) 720
1D Compatibility (HY) -20000 + (ID) 5800
Total energy: -160808.0 ( -85.17 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_3R12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R12-query.scw
PDB file :
Tito_Scwrl_3R12.pdb
: