Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLEIPTKYDSLLKKKVSLKTSFTFMLIIVLIIWSFIYTGFNFGDLMIGIPQIGDLFKQMIPPDFEYLQQITTPMLDTIRMAIVSTVLGSIVSIPIALLCASNIVHQKWISIPSRFILNIVRTIP---DLLLAAIFVAVFGIGQIP----GILALFILTICIIGKLLYESLETIDPGPMEAMTAVGANKIKWIVFGVVPQAISSFMSYVLYAFEVNIRASAVLGLVGAGGIGLFYDQTLGLFQYPKTATIILFTLVIVVVIDYISTKVRAHLA
4YMT Chain:C ((22-167))-----------------------------------------------------------------------------TLKLTFLAVTIGVLMGLFIALMKMSSI---KPIKLVASSYIEVIRGTPLLVQLLLIYNGLMQFGM-NIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIG----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127051 for 961 contacts (-132.2/contact) +
2D Compatibility (PS) -14315 + (NN) 2761 + (LL) 10504
1D Compatibility (HY) -11200 + (ID) 1850
Total energy: -141151.0 ( -146.88 by residue)
QMean score : 0.262

(partial model without unconserved sides chains):
PDB file : Tito_4YMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMT-query.scw
PDB file : Tito_Scwrl_4YMT.pdb: