Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQ----DVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK
3S4U Chain:A ((5-267))----------------------------------------------KALNFGIISTESQQNLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQT----VAADGSP------GYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPGYYVFAKNNISASDFKRTVNA-GAETNALAVANKQVDVATNNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPE-EKAVLERLGWAPFRASSDLQLVPIRQL-ALFKEMQ


General information:
TITO was launched using:
RESULT:

Template: 3S4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35317 for 2035 contacts (-17.4/contact) +
2D Compatibility (PS) -27715 + (NN) -9929 + (LL) 2824
1D Compatibility (HY) -15600 + (ID) 3300
Total energy: -89037.0 ( -43.75 by residue)
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3S4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3S4U-query.scw
PDB file : Tito_Scwrl_3S4U.pdb: