Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
3BFV Chain:A ((16-41)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKRIKDEEDVEKELGLPVLGSIQKFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -869 for 97 contacts (-9.0/contact) +
2D Compatibility (PS) -2711 + (NN) -195 + (LL) 16584
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: 8309.0 ( 85.66 by residue)
QMean score : 0.689
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