Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLN--HQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYR-EQYDKILLYSGNMGQLQDMETLI-SFLKLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYN-FINTHSSKELHE-MGERA-----HQLFKDKYTREINTMKYYNLLK |
| 3MBO Chain:A ((181-407)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAVSHSLINETHELVKPNKDIQTVYNFIDER-VYFKRDMTQLKKEYGISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDGPEFCTILQLVKNLHIEDRVLF-LGKQDNVAELLAMSDLMLLLSEKESFGLVLLEA----MACGVP--CIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETI-YYDVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MBO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76168 for 1646 contacts (-46.3/contact) +
2D Compatibility (PS) -22229 + (NN) -3405 + (LL) 13524
1D Compatibility (HY) -17200 + (ID) 2800
Total energy: -108278.0 ( -65.78 by residue)
QMean score : 0.383
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