Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
| 3FOK Chain:A ((54-99)) | --------------------------------------------------------------------------------------------------RGALAVGDNETAMANRYELLERMA---IALSRPGVDG---VLGTPDIIDD------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4860 for 181 contacts (26.9/contact) +
2D Compatibility (PS) -4691 + (NN) -1815 + (LL) 11476
1D Compatibility (HY) 2400 + (ID) 150
Total energy: 12080.0 ( 66.74 by residue)
QMean score : -0.060
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