Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAG--------AVLPLLPTTPFLLVAVFCFARS-----SDRFYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
2WZG Chain:A ((451-514))
--------GAIYNALGGASNFTTTHRRSTGPMLPTTPPRVLQVFCDAHDKGPFVSDNIARWQTN----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WZG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21089 for 165 contacts (-127.8/contact) +
2D Compatibility (PS) -4521 + (NN) 673 + (LL) 9696
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -17041.0 ( -103.28 by residue)
QMean score : 0.079
(partial model without unconserved sides chains):
PDB file :
Tito_2WZG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WZG-query.scw
PDB file :
Tito_Scwrl_2WZG.pdb
: