Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHMTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDIDLNDDEV---ISIFVFDKSIE
2WJG Chain:A ((116-170))
-------------------------------------------------------------LLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAISIAVKDK---
General information:
TITO was launched using:
RESULT:
Template:
2WJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13252 for 279 contacts (-47.5/contact) +
2D Compatibility (PS) -5343 + (NN) -243 + (LL) 3912
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -20226.0 ( -72.49 by residue)
QMean score : 0.154
(partial model without unconserved sides chains):
PDB file :
Tito_2WJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJG-query.scw
PDB file :
Tito_Scwrl_2WJG.pdb
: