Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAIGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPYQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN |
| 2NRG Chain:A ((63-81)) | -----------------------------------------------------------------------------------------------------------------------------PAPNITGALETGIELIKHL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3425 for 62 contacts (55.2/contact) +
2D Compatibility (PS) -1883 + (NN) -804 + (LL) 13416
1D Compatibility (HY) 400 + (ID) 250
Total energy: 14304.0 ( 230.71 by residue)
QMean score : -0.082
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