Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQMIFT---SVQIPEEDDETKYHYFTKLLNLLKYEQVTYLIDANPSILTP----SFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQ---GLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLVNKKNELIYQFNPKAQIYGFIVGSGLR-GP--LHKGLPTIEATRHSHPVVAAKLLQETG-VSEVLVGDSLIEMRQAKQLIDFCKHR-----HFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIRS-ETSRQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
| 1X7F Chain:A ((19-351)) | ------------DMAYISAAARHGFSRIFTCLLSV--------AE---FKEIINHAKDNNMEVILDVAPAVF--YSDLSFFAELGADGIRLDVGFDGLT-----EAKMTNNPYGLKIELNVSNDIAYLENILSHQANKSALIG-CHNFYPQKFTGLPYDYFIRCSERFKKHGIRSA--AFITSHVANIGPWDINDGLCTLEEHRNLPIEVQAKHLWATGLIDDVIIGNAYASEEELEKLGNLNRYMLQLKVHF---VDEATEVEKRATLQELHVRRGDITEYMVRSTEVRKKYKDYDFPVRESVLQERGQVVIGNNSFGKYKGELQIILKEMPIDERKNIVGTIAEEELFLLDYV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139760 for 2275 contacts (-61.4/contact) +
2D Compatibility (PS) -31524 + (NN) -13835 + (LL) 3132
1D Compatibility (HY) -14000 + (ID) 4400
Total energy: -200387.0 ( -88.08 by residue)
QMean score : 0.309
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