Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQQLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQN-RDS-MYASFDGKI---MIKNIDNDSDNQPILYLI-SKESHIKTSVTEFDLNKVKKGDKVNLSITSTGKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSI-SASPIFKSNNNSELSKYGVIIDDLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGD--IIVEKGLKPGDKLIKQPKSTMNDGDKVEISS
4L8J Chain:A ((43-325))--------------------------------------------------------------------GQIINLPVVEGQRVKKGQLIAAIDPRDISLQYAADKAA-YETAAAQVERN-KRLLGRQAISLQEYEISVANYQKAKSAYELSTNNMRDTKLLAPFDGSIETRLVENYQRVNSGEGIVRLVNTRKLRIKFTVPDDYLYLLRAKDA---TFKVEFDTYKGTV-----FNARLEEYLDI-STDGTGIPVTIIIDDAAFDRTIYDVKPGFTCNIR--------LASDIAPFIEEKLM---NVPLSAVFGDSE--NKNTYVWIVKDNK-VNRREVTVYSPTGEANLLISKGLKPGETVVTAGVYQLVEGQRIK---


General information:
TITO was launched using:
RESULT:

Template: 4L8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 37791 for 1510 contacts (25.0/contact) +
2D Compatibility (PS) -29042 + (NN) -4032 + (LL) 8704
1D Compatibility (HY) -15600 + (ID) 3350
Total energy: -5529.0 ( -3.66 by residue)
QMean score : 0.239

(partial model without unconserved sides chains):
PDB file : Tito_4L8J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L8J-query.scw
PDB file : Tito_Scwrl_4L8J.pdb: