Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKSAVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGETTPYSNIALESNVTF
3P13 Chain:A ((7-136))
----AVLNEHISKAIATIGHFDLLTINDAGMPIPNDHRRIDLAVTKNLPRFIDVLATVLEEMEIQKIYLAEEIKEHNPTQLQQIKQLISSEIEIIFIPHEEMKSNLAHPLNKGNIRTGETTPYSNIALESNVTF
General information:
TITO was launched using:
RESULT:
Template:
3P13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60316 for 993 contacts (-60.7/contact) +
2D Compatibility (PS) -13688 + (NN) -5301 + (LL) 308
1D Compatibility (HY) -18000 + (ID) 6500
Total energy: -103497.0 ( -104.23 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3P13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P13-query.scw
PDB file :
Tito_Scwrl_3P13.pdb
: