Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEIKYKVITKDAFALPYTIIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSLDCIIEDVYASFDAIQSQYSNCPIFTF-GRSSGAYLSLLIARDRDIDGV-----IDFYGYSRIN--TEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTD-SKYNIAPDELKTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTFERVNKNEHDFDRRPNDEA-ITIYRKVVDFLNAITMV
2QRU Chain:A ((18-271))
------------------TIYPTTTEPTN-YVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTKIDHILRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKL-------LKQAISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTFPPCFSTASSSDEEVPFRYSKKIGRTIPESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWL------
General information:
TITO was launched using:
RESULT:
Template:
2QRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165616 for 1933 contacts (-85.7/contact) +
2D Compatibility (PS) -25985 + (NN) -10630 + (LL) 2656
1D Compatibility (HY) -22000 + (ID) 3750
Total energy: -225325.0 ( -116.57 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_2QRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRU-query.scw
PDB file :
Tito_Scwrl_2QRU.pdb
: