Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTRRKNIGLTTSGIKLVEAFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
4L9N Chain:A ((2-139))
-EFTYSYLFRMISHEMKQKADQKLEQFDITNEQGHTLGYLYAHQQDGLTQNDIAKALQRTGPTVSNLLRNLERKKLIYRYVDAQDTR-KNIGLTTSGIKLVEVFTSIFDEMEQTLVSQLSEEENEQMKANLTKMLSSLQ
General information:
TITO was launched using:
RESULT:
Template:
4L9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42646 for 832 contacts (-51.3/contact) +
2D Compatibility (PS) -14567 + (NN) -5553 + (LL) 308
1D Compatibility (HY) -17600 + (ID) 6800
Total energy: -86858.0 ( -104.40 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_4L9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L9N-query.scw
PDB file :
Tito_Scwrl_4L9N.pdb
: