Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPEEKGSITLSKEAAIIFATAKFKPFKNRIKNNPLKTNPFLKLHENKKS
2JYA Chain:A ((57-68))
-----------TQEQAEAYAQRK---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 89 for 40 contacts (2.2/contact) +
2D Compatibility (PS) -1402 + (NN) -896 + (LL) 1792
1D Compatibility (HY) 400 + (ID) 200
Total energy: -217.0 ( -5.42 by residue)
QMean score : 0.226
(partial model without unconserved sides chains):
PDB file :
Tito_2JYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JYA-query.scw
PDB file :
Tito_Scwrl_2JYA.pdb
: