Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
4WK3 Chain:A ((21-129))
MKMIIAIVQDQDSQELADQLVKNNFRATKLATT-------NTTFLCGVNDDRVDEILSVINQTCGN---------------------------GGATVFVMPVDAFHQF
General information:
TITO was launched using:
RESULT:
Template:
4WK3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57215 for 500 contacts (-114.4/contact) +
2D Compatibility (PS) -8523 + (NN) -5272 + (LL) 1444
1D Compatibility (HY) -11200 + (ID) 3750
Total energy: -84516.0 ( -169.03 by residue)
QMean score : 0.708
(partial model without unconserved sides chains):
PDB file :
Tito_4WK3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WK3-query.scw
PDB file :
Tito_Scwrl_4WK3.pdb
: