Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETDEVVPDKNATSEDSEEA
2I9X Chain:A ((5-87))
-KVTDVRLRKIQTDGRMKALVSITLDEAFVIHDLRVIEGNSGLFVAMPSKRTPDGEFRDIAHPINSDMRQEIQDAVMKVYDETD----------------
General information:
TITO was launched using:
RESULT:
Template:
2I9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52985 for 490 contacts (-108.1/contact) +
2D Compatibility (PS) -9399 + (NN) -5567 + (LL) 984
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -82317.0 ( -167.99 by residue)
QMean score : 0.684
(partial model without unconserved sides chains):
PDB file :
Tito_2I9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I9X-query.scw
PDB file :
Tito_Scwrl_2I9X.pdb
: