Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD
2BKX Chain:A ((32-238))
-------------------------------LGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHIDSKPSRHF-IPNGNADDLEAECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAA-------------
General information:
TITO was launched using:
RESULT:
Template:
2BKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103625 for 1705 contacts (-60.8/contact) +
2D Compatibility (PS) -22561 + (NN) -15264 + (LL) 3632
1D Compatibility (HY) -18000 + (ID) 5150
Total energy: -160968.0 ( -94.41 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2BKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BKX-query.scw
PDB file :
Tito_Scwrl_2BKX.pdb
: