Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLL--PYNVFFVPARGGLGEN-V-VFQANTIAASMAQQAGGYYTTMYVPDNVSET-TYNTLLLEPSVINTLDKIKQANVILHGIGDALKM---AHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQGQIVH---KVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKIILE |
| 2W48 Chain:A ((9-315)) | ---------------------LIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINY-------------------DYNENLWLEQQLKQKFGLKEAVVASS----EEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRY-INCLVTNRETAELLLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154315 for 2397 contacts (-64.4/contact) +
2D Compatibility (PS) -30790 + (NN) -8178 + (LL) 3544
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -203739.0 ( -85.00 by residue)
QMean score : 0.422
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