Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
3G8W Chain:A ((7-162))
---IRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIY-----
General information:
TITO was launched using:
RESULT:
Template:
3G8W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89019 for 1115 contacts (-79.8/contact) +
2D Compatibility (PS) -16342 + (NN) -371 + (LL) 804
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -125278.0 ( -112.36 by residue)
QMean score : 0.404
(partial model without unconserved sides chains):
PDB file :
Tito_3G8W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G8W-query.scw
PDB file :
Tito_Scwrl_3G8W.pdb
: