Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFVLAIFTIISASVSLGYSIQACASSHNINAYYALSRSLPLFLLAIFSLVIHSAIFLITISIAMILVQFLDAIVGYKSEDVFKTYGPLATSVVNLILLIVFLF
1IXS Chain:A ((20-30))
---------AVMALAALGFK------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1449 for 36 contacts (-40.2/contact) +
2D Compatibility (PS) -1073 + (NN) 470 + (LL) 9988
1D Compatibility (HY) -400 + (ID) 150
Total energy: 7386.0 ( 205.17 by residue)
QMean score : 0.042
(partial model without unconserved sides chains):
PDB file :
Tito_1IXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXS-query.scw
PDB file :
Tito_Scwrl_1IXS.pdb
: