Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDIVKENPDVEIFEEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
1DV5 Chain:A ((7-81))
---KNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ
General information:
TITO was launched using:
RESULT:
Template:
1DV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47326 for 524 contacts (-90.3/contact) +
2D Compatibility (PS) -7771 + (NN) -3708 + (LL) 444
1D Compatibility (HY) -8400 + (ID) 1600
Total energy: -68361.0 ( -130.46 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_1DV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DV5-query.scw
PDB file :
Tito_Scwrl_1DV5.pdb
: