Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTERILEVNDLHVSFDITAGEVQAVRGVDFYLNKGETLAIVGESGSGKSVTTKAITKL--FQGDTGRIKKGEILFLGEDLAKKPENELIKLRGKDISMIFQDPMTSLNPTMQIGKQVMEPLIKHKNYSKAQAKKRALEILNLVGLPNAEKRFKAYPHQFSGGQRQRIVIATALACEPKVLIADEPTTALDVTMQAQILDLMKELQQKIDTAIIFITHDLGVVANIADRVAVMYGGQMVETGDVNEIFYDPKHPYTWGLLSSMPDLSTTNDTPLLAIPGAPPDLLHPPKGDAFARRSQYALDIDFKVEPPWFKVSPTHFVKSWLLDARAPKVELPELVKQRMKPMPNNYEKPLKVERVSFNEK |
4U00 Chain:A ((3-241)) | ---PIIRIRNLHKWF----GPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQ-------EGEVVVDG--LSVKDDRALREIR-REVGMVFQQ--FNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQARK---YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVV-VTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145025 for 1971 contacts (-73.6/contact) +
2D Compatibility (PS) -25961 + (NN) -14628 + (LL) 6216
1D Compatibility (HY) -20800 + (ID) 4750
Total energy: -204948.0 ( -103.98 by residue)
QMean score : 0.501
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