Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNNVLLEVKDLETSLKINN--EW---LATVENISFELSKGEVLGIVGESGCGKSILSKSIIKLLPEKISKLSSGEVIFDGKRIDTLNEKQLLDIRGNDIAMIFQEPMTALNPVFTIKNQLVESIKSHKKISKKEANNLAKDLLKKVGIARQDEILNSYPHQLSGGMRQRVMIAMAISCSPKLLIADEPTTALDVTIQAQILDLLKELQKETQMAIMMITHDLSVVAEFCDKVLVMYAGQIVEFGGIKEILHNPKHPYTQKLLSTIPKLKEGQKRLETIEGIVPSIQAFHVNKCRFANRCNKKLDICNNQSPKMHVCEDVIVRCHLYKNEYKEI |
4U00 Chain:A ((3-241)) | ------------PIIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTI-----NRLEDFQEGEVVVDG--LSVKDDRALREIR-REVGMVFQQ--FNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGILDQ---ARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDL-AQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163592 for 1944 contacts (-84.2/contact) +
2D Compatibility (PS) -25338 + (NN) -10611 + (LL) 6852
1D Compatibility (HY) -19600 + (ID) 4200
Total energy: -216489.0 ( -111.36 by residue)
QMean score : 0.533
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