Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRAHAKKPLTTKSCKVKEGYMRRAHAKKPLTTKSCKVKEGYMHRAQAKKPLTTKGCKEEEGYMHRAHA
1I27 Chain:A ((11-27))
-----------------TEDAVRRYLTRKPMTTK-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1I27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1187 for 54 contacts (22.0/contact) +
2D Compatibility (PS) -1855 + (NN) -163 + (LL) 3684
1D Compatibility (HY) -400 + (ID) 400
Total energy: 2053.0 ( 38.02 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_1I27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I27-query.scw
PDB file :
Tito_Scwrl_1I27.pdb
: