Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
2YXY Chain:A ((12-19))
MTKEELQQ------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2280 for 26 contacts (87.7/contact) +
2D Compatibility (PS) -863 + (NN) -1044 + (LL) 2740
1D Compatibility (HY) -400 + (ID) 100
Total energy: 2613.0 ( 100.50 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_2YXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YXY-query.scw
PDB file :
Tito_Scwrl_2YXY.pdb
: