Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
1QR5 Chain:A ((1-88))
MEQQSYTIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDEADAIQAITDVLSKEGLTE
General information:
TITO was launched using:
RESULT:
Template:
1QR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32365 for 690 contacts (-46.9/contact) +
2D Compatibility (PS) -9273 + (NN) -736 + (LL) 0
1D Compatibility (HY) -10800 + (ID) 4150
Total energy: -57324.0 ( -83.08 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_1QR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QR5-query.scw
PDB file :
Tito_Scwrl_1QR5.pdb
: