Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQATMKNAALKQLTKDADEILHLIKVQLDNLTLPSCPLYEEVLDTQMFGLQKEVDFAVKLGLVDREDGKQIMLRLEKELSKLHEAFTLV
2GBO Chain:A ((3-82))
---EGISKKFAIQLLEDDAERIKMLIRNQKNSLCISQCKAFEEVVDTQMYGFSRQVTYATRLGILTNDEGHRLLSDLERELNQ--------
General information:
TITO was launched using:
RESULT:
Template:
2GBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10220 for 339 contacts (30.1/contact) +
2D Compatibility (PS) -8303 + (NN) -1463 + (LL) 1104
1D Compatibility (HY) 2400 + (ID) 650
Total energy: 3308.0 ( 9.76 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2GBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GBO-query.scw
PDB file :
Tito_Scwrl_2GBO.pdb
: