Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEIVIASNNQGKINDFKVIFPDYHVIGISEL---IPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKL--GNTTDRRAQFVCVISM--SGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGEKNV
3TQU Chain:A ((6-197))
--EIVLASQNSSKLAEMQELLRDLEIKFIPQTEFSVPD--IEETGSTFVENAIIKARHAAKQTGLPALADDSGLTIAALNSAPGVFSSRYAGKNATDAERIQKVLEALEAADDSDRSASFHCVIALMENENDPAPLICHGVWEGEIAREPRGKNGFGYDPIFYVPSHQRTAAELDPQEKNAISHRGQALEQLSTVL------
General information:
TITO was launched using:
RESULT:
Template:
3TQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44342 for 1475 contacts (-30.1/contact) +
2D Compatibility (PS) -20212 + (NN) -10933 + (LL) 540
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -93197.0 ( -63.18 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3TQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TQU-query.scw
PDB file :
Tito_Scwrl_3TQU.pdb
: