Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAFQAISRNAVYTDTFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATETPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGD-LSVSFKRTKDI---LKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ |
1U7W Chain:A ((12-220)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEK------DELTIKMVKNPDIVAGVAALKDHRP--YVVGFAAETNNVEEYARQKRIRKNLDLICANDV-------------LHLFWQDGDKV-LPLERKELLGQLLLDEIVTRY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U7W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86521 for 1450 contacts (-59.7/contact) +
2D Compatibility (PS) -20368 + (NN) -10940 + (LL) 14780
1D Compatibility (HY) -16400 + (ID) 4000
Total energy: -123449.0 ( -85.14 by residue)
QMean score : 0.568
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