Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
2X2B Chain:A ((5-76))
--TLERVTKIIVDRLGVDEADVKLEASFKEDLGADSLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQN---
General information:
TITO was launched using:
RESULT:
Template:
2X2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38203 for 473 contacts (-80.8/contact) +
2D Compatibility (PS) -7836 + (NN) -2359 + (LL) 656
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -59342.0 ( -125.46 by residue)
QMean score : 0.881
(partial model without unconserved sides chains):
PDB file :
Tito_2X2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X2B-query.scw
PDB file :
Tito_Scwrl_2X2B.pdb
: