Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLLTNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
1QM6 Chain:A ((19-53))
-------VSILENDLSKNEPESVRKNLEILKENMHELQLGST--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 655 for 148 contacts (4.4/contact) +
2D Compatibility (PS) -3499 + (NN) 1593 + (LL) 3372
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -829.0 ( -5.60 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1QM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QM6-query.scw
PDB file :
Tito_Scwrl_1QM6.pdb
: