Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSDQ
2OP8 Chain:A ((1-59))
-PYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGKRLSD-
General information:
TITO was launched using:
RESULT:
Template:
2OP8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13488 for 311 contacts (-43.4/contact) +
2D Compatibility (PS) -6721 + (NN) -4185 + (LL) 328
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -31466.0 ( -101.18 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_2OP8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OP8-query.scw
PDB file :
Tito_Scwrl_2OP8.pdb
: