Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPL--ETKLAVVADTKRQGSVILAATPKLKELGIK----TGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIALRYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFGILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRD-YHFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
4IR9 Chain:F ((3-275)) | ---------RKIIHVDMDCFFAAV---EMRDNPALRDIPIAIGGSRERRGVISTANYPA-RKFGVRSAMPTGMALKLCPH---LTLLPGRFDAYKEASNHIREIFSRYT--SRIEPLSLDEAYLDVTDSVHCHGSAT-LIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITP---AEVPAFLQTL-PLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSER--LRKSVGVERTMAEDIHHWSECEAIIERLYPELERRL--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107589 for 1986 contacts (-54.2/contact) +
2D Compatibility (PS) -28502 + (NN) -12234 + (LL) 10836
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -154789.0 ( -77.94 by residue)
QMean score : 0.399
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