Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
| 4UOF Chain:A ((68-109)) | -----------------------------------------------------------------------------------------------------------------------------------------------------SSGPVVAMCWEGTGVVKTARVMMGETRPADSKPGTIRGDFCI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22319 for 184 contacts (-121.3/contact) +
2D Compatibility (PS) -4220 + (NN) 1195 + (LL) 13964
1D Compatibility (HY) -800 + (ID) 700
Total energy: -12880.0 ( -70.00 by residue)
QMean score : 0.014
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