Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSRDIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQINWEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL
1F9N Chain:A ((3-149))
---KGQRHIKIREIITSNEIETQDELVDMLKQDGYKVTQATVSRDIKELHLVKVPTNNGSYKYSLPADQRFNPLSKLKRALMDAFVKIDSASHMIVLKTMPGNAQAIGALMDNLDWDEMMGTICGDDTILIICRTPEDTEGVKNRLLELL
General information:
TITO was launched using:
RESULT:
Template:
1F9N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85232 for 1014 contacts (-84.1/contact) +
2D Compatibility (PS) -16241 + (NN) -5294 + (LL) 132
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -129485.0 ( -127.70 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1F9N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F9N-query.scw
PDB file :
Tito_Scwrl_1F9N.pdb
: