Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYGQVAY
2ID1 Chain:A ((4-104))
---QEISKLAIEALEDIKGKDIIELDTSKLTSLFQRMIVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHESGEWVLVDAGDVVVHVMLPAVRDYYDIEALW-------------
General information:
TITO was launched using:
RESULT:
Template:
2ID1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71837 for 794 contacts (-90.5/contact) +
2D Compatibility (PS) -11470 + (NN) -6472 + (LL) 868
1D Compatibility (HY) -9200 + (ID) 1750
Total energy: -99861.0 ( -125.77 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_2ID1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ID1-query.scw
PDB file :
Tito_Scwrl_2ID1.pdb
: