Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
3ASY Chain:A ((8-196))
-----VIGIAGGTASGKTTLAQALARTL-GERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEM------------
General information:
TITO was launched using:
RESULT:
Template:
3ASY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72451 for 1455 contacts (-49.8/contact) +
2D Compatibility (PS) -20487 + (NN) -9749 + (LL) 1820
1D Compatibility (HY) -19600 + (ID) 5000
Total energy: -125467.0 ( -86.23 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3ASY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASY-query.scw
PDB file :
Tito_Scwrl_3ASY.pdb
: