Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIALTAYKRIEAISDEGSFTEFDKGMTSANPLDF---PSYLEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK
2F9Y Chain:B ((23-274))----------------------------VWTKCDSCGQVLYRAELERNLEVCPKCDHHMRMTARNRLHSLLDEGSLVELGSELEPKDVLKFRDSKKYK------QKETGEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGPRVIEQTVREKLPPGFQRSEFLIEKGAIDMIVRRPEMRLKLASIL--------


General information:
TITO was launched using:
RESULT:

Template: 2F9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111431 for 2043 contacts (-54.5/contact) +
2D Compatibility (PS) -26304 + (NN) -9615 + (LL) 2608
1D Compatibility (HY) -25200 + (ID) 6150
Total energy: -176092.0 ( -86.19 by residue)
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_2F9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F9Y-query.scw
PDB file : Tito_Scwrl_2F9Y.pdb: