Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTQQQNDKRTLKNKHTYQNEPLPNRKDFVVSFITGALVGSALGLYFKNKVYQKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAALKAQQAAIKEEASANNLSDTSQEAQEIQEAKR---EAQAEADKSVAVSNEESKASALKVQQAAIKEEASANNLSDTSQEAQEIQEAKKEAQAETDKSAAVSNEEPKAVALKAQQAAIKEEASANNLSDTSQ------EAQ---EVQEAKKEAQAEKDSDTSTKDASAAKVEVSKPESQAERLANAAKQKQAKLTPGSKESQLTEALFAEKPVAKNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFENGVITRKADEKTTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHNKKSSQGAKKQSSSSKLTQKNNQTSNKNSKTTNAKSSNASKTPNAKVEKANSKIEKRTFND |
2QZV Chain:A ((661-779)) | ----------------------------------------------------------------------------------------------------------------AIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAE----KARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAK-------LKAQALAIETEAELERVKKVREMELIYARAQLEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31546 for 398 contacts (79.3/contact) +
2D Compatibility (PS) -11251 + (NN) -2502 + (LL) 20972
1D Compatibility (HY) -800 + (ID) 1450
Total energy: 36515.0 ( 91.75 by residue)
QMean score : 0.393
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