Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLF-DITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDVPYVLDTIKLLTEE-KLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHD---VPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTK-TLQGNLDPSILLAPWNVIEERLKPILDQGMENGK---HIFNLGHGVFPEVQPETLRKVSEFVHTYTQR |
| 4ZR8 Chain:A ((11-362)) | --TLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAG--LSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226738 for 3002 contacts (-75.5/contact) +
2D Compatibility (PS) -36270 + (NN) -13701 + (LL) 708
1D Compatibility (HY) -25200 + (ID) 6600
Total energy: -307801.0 ( -102.53 by residue)
QMean score : 0.519
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