Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPP--LDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGI----EDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD |
| 3GIG Chain:A ((26-216)) | -------------------------------------------------------------------------------------------------------------------------------------------------EERQRIARDLHDTLGQKLSLIGLKSDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN--IKQIL----EAADIMFIYE--EEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSFS--HGLLGMRERLEFANGSLHIDT--ENGTKLTMAIPNN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GIG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36223 for 1222 contacts (-29.6/contact) +
2D Compatibility (PS) -20502 + (NN) -12764 + (LL) 14144
1D Compatibility (HY) -7600 + (ID) 2300
Total energy: -65245.0 ( -53.39 by residue)
QMean score : 0.491
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