Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
2DQN Chain:C ((3-100))
--KVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
General information:
TITO was launched using:
RESULT:
Template:
2DQN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3456 for 400 contacts (-8.6/contact) +
2D Compatibility (PS) -10263 + (NN) -3194 + (LL) 260
1D Compatibility (HY) -10400 + (ID) 4900
Total energy: -31953.0 ( -79.88 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_2DQN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DQN-query.scw
PDB file :
Tito_Scwrl_2DQN.pdb
: