Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRSLLFLTVLLLLFSFSSITNEVSASSSFDKGKYKKGDDASYFEPTGPYLMVNVTGVDSKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
1C76 Chain:A ((16-136))
------------------------------------------SYFEPTGPYLMVNVTGVDGKGNELLSPHYVEFPIKPGTTLTKEKIEYYVEWALDATAYKEFRVVELDPSAKIEVTYYDKNKKKEETKSFPITEKGFVVPDLSEHIKNPGFNLITKVVIEKK
General information:
TITO was launched using:
RESULT:
Template:
1C76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65522 for 827 contacts (-79.2/contact) +
2D Compatibility (PS) -13280 + (NN) -3421 + (LL) 2864
1D Compatibility (HY) -17200 + (ID) 6000
Total energy: -102559.0 ( -124.01 by residue)
QMean score : 0.691
(partial model without unconserved sides chains):
PDB file :
Tito_1C76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C76-query.scw
PDB file :
Tito_Scwrl_1C76.pdb
: