Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQDIISTIGDLVKWIIDTVNKFTKK
2DTB Chain:A ((1-26))
MAQDIISTIGDLVKWIIDTVNKFTKK
General information:
TITO was launched using:
RESULT:
Template:
2DTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5066 for 101 contacts (-50.2/contact) +
2D Compatibility (PS) -2490 + (NN) 1277 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -11979.0 ( -118.60 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2DTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DTB-query.scw
PDB file :
Tito_Scwrl_2DTB.pdb
: