Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
4G4K Chain:A ((6-103))
--------------------------------------------------------------------------------------------------------------------------------------------ETIELKRGSNSVYVQYDDIMFFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI
General information:
TITO was launched using:
RESULT:
Template:
4G4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67285 for 710 contacts (-94.8/contact) +
2D Compatibility (PS) -10407 + (NN) -2312 + (LL) 10856
1D Compatibility (HY) -14400 + (ID) 4900
Total energy: -88448.0 ( -124.57 by residue)
QMean score : 0.570
(partial model without unconserved sides chains):
PDB file :
Tito_4G4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G4K-query.scw
PDB file :
Tito_Scwrl_4G4K.pdb
: