Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTLLASSLAVGLGIVAGNAGHEAHASEADLNKASLAQMAQSNDQTLNQKPIEAGAYNYTFDYEGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVEPSAVQANQVQSQEVEAPQNAQTQQPQASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNPTSGAAGKYQFLQSTWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA |
| 3BKV Chain:A ((90-150)) | -----------------------------------------------------------------------------------------------------------------------------------TANKSRAAATPVMNAVENATGVRSQL-LLTFASIESAFDYEIKAKTSSATGWFQFLTGTWKT-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16875 for 371 contacts (45.5/contact) +
2D Compatibility (PS) -6661 + (NN) -2942 + (LL) 9608
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 13880.0 ( 37.41 by residue)
QMean score : 0.170
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