Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG
2W5J Chain:A ((9-72))
-SVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVAL-----
General information:
TITO was launched using:
RESULT:
Template:
2W5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28139 for 357 contacts (-78.8/contact) +
2D Compatibility (PS) -6452 + (NN) 1570 + (LL) 572
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -41049.0 ( -114.98 by residue)
QMean score : 0.109
(partial model without unconserved sides chains):
PDB file :
Tito_2W5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W5J-query.scw
PDB file :
Tito_Scwrl_2W5J.pdb
: