Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYIKN
2FNP Chain:A ((103-215))
ITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYFKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRI--
General information:
TITO was launched using:
RESULT:
Template:
2FNP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42454 for 721 contacts (-58.9/contact) +
2D Compatibility (PS) -12206 + (NN) -5124 + (LL) -16
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -69500.0 ( -96.39 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_2FNP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FNP-query.scw
PDB file :
Tito_Scwrl_2FNP.pdb
: